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JAL-3365 per-sequence secondary structure symbol ‘X’ is not properly exported and...
[jalview.git]
/
src
/
jalview
/
datamodel
/
VisibleColsCollection.java
diff --git
a/src/jalview/datamodel/VisibleColsCollection.java
b/src/jalview/datamodel/VisibleColsCollection.java
index
e9437a7
..
4ca51b5
100644
(file)
--- a/
src/jalview/datamodel/VisibleColsCollection.java
+++ b/
src/jalview/datamodel/VisibleColsCollection.java
@@
-32,17
+32,17
@@
public class VisibleColsCollection implements AlignmentColsCollectionI
HiddenColumns hidden;
HiddenColumns hidden;
- public VisibleColsCollection(int s, int e, AlignmentI al)
+ public VisibleColsCollection(int s, int e, HiddenColumns h)
{
start = s;
end = e;
{
start = s;
end = e;
- hidden = al.getHiddenColumns();
+ hidden = h;
}
@Override
public Iterator<Integer> iterator()
{
}
@Override
public Iterator<Integer> iterator()
{
- return new VisibleColsIterator(start, end, hidden);
+ return hidden.getVisibleColsIterator(start, end);
}
@Override
}
@Override