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JAL-629 Change all stdout and stderr output to use Console.outPrintln and Console...
[jalview.git]
/
src
/
jalview
/
datamodel
/
features
/
FeatureStore.java
diff --git
a/src/jalview/datamodel/features/FeatureStore.java
b/src/jalview/datamodel/features/FeatureStore.java
index
eb5688c
..
c19d782
100644
(file)
--- a/
src/jalview/datamodel/features/FeatureStore.java
+++ b/
src/jalview/datamodel/features/FeatureStore.java
@@
-401,7
+401,7
@@
public class FeatureStore
SequenceFeature sf = contactFeatureEnds.get(index);
if (!sf.isContactFeature())
{
SequenceFeature sf = contactFeatureEnds.get(index);
if (!sf.isContactFeature())
{
- System.err.println("Error! non-contact feature type " + sf.getType()
+ jalview.bin.Console.errPrintln("Error! non-contact feature type " + sf.getType()
+ " in contact features list");
index++;
continue;
+ " in contact features list");
index++;
continue;
@@
-454,7
+454,7
@@
public class FeatureStore
SequenceFeature sf = contactFeatureStarts.get(index);
if (!sf.isContactFeature())
{
SequenceFeature sf = contactFeatureStarts.get(index);
if (!sf.isContactFeature())
{
- System.err.println("Error! non-contact feature " + sf.toString()
+ jalview.bin.Console.errPrintln("Error! non-contact feature " + sf.toString()
+ " in contact features list");
index++;
continue;
+ " in contact features list");
index++;
continue;