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JAL-2089 patch broken merge to master for Release 2.10.0b1
[jalview.git]
/
src
/
jalview
/
datamodel
/
xdb
/
embl
/
EmblFile.java
diff --git
a/src/jalview/datamodel/xdb/embl/EmblFile.java
b/src/jalview/datamodel/xdb/embl/EmblFile.java
index
87b3079
..
1dd854a
100644
(file)
--- a/
src/jalview/datamodel/xdb/embl/EmblFile.java
+++ b/
src/jalview/datamodel/xdb/embl/EmblFile.java
@@
-1,6
+1,6
@@
/*
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*
* This file is part of Jalview.
*
@@
-46,6
+46,8
@@
public class EmblFile
Vector<EmblError> errors;
Vector<EmblError> errors;
+ String text;
+
/**
* @return the entries
*/
/**
* @return the entries
*/
@@
-152,6
+154,10
@@
public class EmblFile
*/
static void canonicaliseDbRefs(EmblFile record)
{
*/
static void canonicaliseDbRefs(EmblFile record)
{
+ if (record.getEntries() == null)
+ {
+ return;
+ }
for (EmblEntry entry : record.getEntries())
{
if (entry.getDbRefs() != null)
for (EmblEntry entry : record.getEntries())
{
if (entry.getDbRefs() != null)
@@
-183,4
+189,14
@@
public class EmblFile
}
}
}
}
}
}
+
+ public String getText()
+ {
+ return text;
+ }
+
+ public void setText(String text)
+ {
+ this.text = text;
+ }
}
}