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JAL-3954 Do not retrieve alignment for failed jobs
[jalview.git]
/
src
/
jalview
/
ext
/
ensembl
/
EnsemblCdna.java
diff --git
a/src/jalview/ext/ensembl/EnsemblCdna.java
b/src/jalview/ext/ensembl/EnsemblCdna.java
index
e01ad17
..
ec7318f
100644
(file)
--- a/
src/jalview/ext/ensembl/EnsemblCdna.java
+++ b/
src/jalview/ext/ensembl/EnsemblCdna.java
@@
-23,6
+23,7
@@
package jalview.ext.ensembl;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.SequenceI;
import jalview.io.gff.SequenceOntologyI;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.SequenceI;
import jalview.io.gff.SequenceOntologyI;
+import jalview.util.Platform;
import java.util.ArrayList;
import java.util.List;
import java.util.ArrayList;
import java.util.List;
@@
-44,7
+45,7
@@
public class EnsemblCdna extends EnsemblSeqProxy
* or ENSMUST or similar for other species
* or CCDSnnnnn.nn with at least 3 digits
*/
* or ENSMUST or similar for other species
* or CCDSnnnnn.nn with at least 3 digits
*/
- private static final Regex ACCESSION_REGEX = new Regex(
+ private static final Regex ACCESSION_REGEX = Platform.newRegex(
"(ENS([A-Z]{3}|)[TG][0-9]{11}$)" + "|" + "(CCDS[0-9.]{3,}$)");
/*
"(ENS([A-Z]{3}|)[TG][0-9]{11}$)" + "|" + "(CCDS[0-9.]{3,}$)");
/*