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JAL-629 Change --open to --append and --opennew to --open. Make --open(new) part...
[jalview.git]
/
src
/
jalview
/
ext
/
ensembl
/
EnsemblGenomes.java
diff --git
a/src/jalview/ext/ensembl/EnsemblGenomes.java
b/src/jalview/ext/ensembl/EnsemblGenomes.java
index
bbd1f26
..
9fc6a53
100644
(file)
--- a/
src/jalview/ext/ensembl/EnsemblGenomes.java
+++ b/
src/jalview/ext/ensembl/EnsemblGenomes.java
@@
-20,6
+20,9
@@
*/
package jalview.ext.ensembl;
*/
package jalview.ext.ensembl;
+import jalview.bin.Cache;
+import jalview.datamodel.DBRefSource;
+
/**
* A class to behave much like EnsemblGene but referencing the ensemblgenomes
* domain and data
/**
* A class to behave much like EnsemblGene but referencing the ensemblgenomes
* domain and data
@@
-35,13
+38,15
@@
public class EnsemblGenomes extends EnsemblGene
*/
public EnsemblGenomes()
{
*/
public EnsemblGenomes()
{
- super(ENSEMBL_GENOMES_REST);
+ super();
+ setDomain(Cache.getDefault(ENSEMBL_GENOMES_BASEURL,
+ DEFAULT_ENSEMBL_GENOMES_BASEURL));
}
@Override
public String getDbName()
{
}
@Override
public String getDbName()
{
- return "EnsemblGenomes";
+ return DBRefSource.ENSEMBLGENOMES;
}
@Override
}
@Override
@@
-56,7
+61,7
@@
public class EnsemblGenomes extends EnsemblGene
@Override
public String getDbSource()
{
@Override
public String getDbSource()
{
- return "EnsemblGenomes";
+ return DBRefSource.ENSEMBLGENOMES;
}
}
}
}