- sb.append("select ").append(getAtomSpec(atomSpec, false)).append("|");
- sb.append(getAtomSpec(refAtoms, false)).append(getCommandSeparator())
- .append("cartoons");
+ sb.append("select ")
+ .append(getAtomSpec(atomSpec, AtomSpecType.RESIDUE_ONLY))
+ .append("|");
+ sb.append(getAtomSpec(refAtoms, AtomSpecType.RESIDUE_ONLY))
+ .append(getCommandSeparator()).append("cartoons");