import java.io.BufferedInputStream;
import java.io.BufferedReader;
import java.io.IOException;
import java.io.BufferedInputStream;
import java.io.BufferedReader;
import java.io.IOException;
/**
* A wrapper class that parses the Sequence Ontology and exposes useful access
* methods. This version uses the BioJava parser.
/**
* A wrapper class that parses the Sequence Ontology and exposes useful access
* methods. This version uses the BioJava parser.
zipStream = new ZipInputStream(new BufferedInputStream(inStream));
ZipEntry entry;
while ((entry = zipStream.getNextEntry()) != null)
zipStream = new ZipInputStream(new BufferedInputStream(inStream));
ZipEntry entry;
while ((entry = zipStream.getNextEntry()) != null)
{
BufferedReader oboFile = new BufferedReader(new InputStreamReader(is));
OboParser parser = new OboParser();
{
BufferedReader oboFile = new BufferedReader(new InputStreamReader(is));
OboParser parser = new OboParser();