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Merge branch 'bug/JAL-4214_system_freeze_when_opening_file_using_gui_in_linux' into...
[jalview.git]
/
src
/
jalview
/
fts
/
service
/
alphafold
/
AlphafoldRestClient.java
diff --git
a/src/jalview/fts/service/alphafold/AlphafoldRestClient.java
b/src/jalview/fts/service/alphafold/AlphafoldRestClient.java
index
7cecaeb
..
a631902
100644
(file)
--- a/
src/jalview/fts/service/alphafold/AlphafoldRestClient.java
+++ b/
src/jalview/fts/service/alphafold/AlphafoldRestClient.java
@@
-20,12
+20,10
@@
*/
package jalview.fts.service.alphafold;
*/
package jalview.fts.service.alphafold;
-import java.net.MalformedURLException;
import java.net.URL;
import java.util.ArrayList;
import java.util.Collection;
import java.util.List;
import java.net.URL;
import java.util.ArrayList;
import java.util.Collection;
import java.util.List;
-import java.util.Map;
import java.util.Objects;
import jalview.bin.Console;
import java.util.Objects;
import jalview.bin.Console;
@@
-69,7
+67,8
@@
public class AlphafoldRestClient
String alphaFoldId = "AF-" + upref.getAccessionId() + "-F1";
try
{
String alphaFoldId = "AF-" + upref.getAccessionId() + "-F1";
try
{
- String urls = EBIAlfaFold.getAlphaFoldCifDownloadUrl(alphaFoldId);
+ String urls = EBIAlfaFold.getAlphaFoldCifDownloadUrl(alphaFoldId,
+ null);
URL url = new URL(urls);
if (!HttpUtils.checkUrlAvailable(url, 50))
{
URL url = new URL(urls);
if (!HttpUtils.checkUrlAvailable(url, 50))
{
@@
-119,7
+118,7
@@
public class AlphafoldRestClient
} catch (Exception e)
{
e.printStackTrace();
} catch (Exception e)
{
e.printStackTrace();
- System.out.println("offending value:" + fieldData);
+ jalview.bin.Console.outPrintln("offending value:" + fieldData);
}
}
}
}
}
}