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JAL-3949 - refactor logging from jalview.bin.Cache to jalview.bin.Console
[jalview.git]
/
src
/
jalview
/
gui
/
AlignViewport.java
diff --git
a/src/jalview/gui/AlignViewport.java
b/src/jalview/gui/AlignViewport.java
index
ea0afe1
..
092d7e7
100644
(file)
--- a/
src/jalview/gui/AlignViewport.java
+++ b/
src/jalview/gui/AlignViewport.java
@@
-29,6
+29,7
@@
import jalview.api.FeatureSettingsModelI;
import jalview.api.FeaturesDisplayedI;
import jalview.api.ViewStyleI;
import jalview.bin.Cache;
import jalview.api.FeaturesDisplayedI;
import jalview.api.ViewStyleI;
import jalview.bin.Cache;
+import jalview.bin.Console;
import jalview.commands.CommandI;
import jalview.datamodel.AlignedCodonFrame;
import jalview.datamodel.Alignment;
import jalview.commands.CommandI;
import jalview.datamodel.AlignedCodonFrame;
import jalview.datamodel.Alignment;
@@
-125,12
+126,12
@@
public class AlignViewport extends AlignmentViewport
// TODO remove these once 2.4.VAMSAS release finished
if (seqsetid != null)
{
// TODO remove these once 2.4.VAMSAS release finished
if (seqsetid != null)
{
- Cache.debug(
+ Console.debug(
"Setting viewport's sequence set id : " + sequenceSetID);
}
if (viewId != null)
{
"Setting viewport's sequence set id : " + sequenceSetID);
}
if (viewId != null)
{
- Cache.debug("Setting viewport's view id : " + viewId);
+ Console.debug("Setting viewport's view id : " + viewId);
}
init();
}
init();
@@
-187,12
+188,12
@@
public class AlignViewport extends AlignmentViewport
// TODO remove these once 2.4.VAMSAS release finished
if (seqsetid != null)
{
// TODO remove these once 2.4.VAMSAS release finished
if (seqsetid != null)
{
- Cache.debug(
+ Console.debug(
"Setting viewport's sequence set id : " + sequenceSetID);
}
if (viewId != null)
{
"Setting viewport's sequence set id : " + sequenceSetID);
}
if (viewId != null)
{
- Cache.debug("Setting viewport's view id : " + viewId);
+ Console.debug("Setting viewport's view id : " + viewId);
}
if (hiddenColumns != null)
}
if (hiddenColumns != null)
@@
-594,7
+595,7
@@
public class AlignViewport extends AlignmentViewport
// calculator.getRegisteredWorkersOfClass(settings.getWorkerClass())
if (needsUpdate)
{
// calculator.getRegisteredWorkersOfClass(settings.getWorkerClass())
if (needsUpdate)
{
- Cache.debug("trigger update for " + calcId);
+ Console.debug("trigger update for " + calcId);
}
}
}
}