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Don't parse input id, leave it as it is
[jalview.git]
/
src
/
jalview
/
gui
/
AlignmentPanel.java
diff --git
a/src/jalview/gui/AlignmentPanel.java
b/src/jalview/gui/AlignmentPanel.java
index
ecdf741
..
43fb5fa
100755
(executable)
--- a/
src/jalview/gui/AlignmentPanel.java
+++ b/
src/jalview/gui/AlignmentPanel.java
@@
-204,7
+204,7
@@
public class AlignmentPanel extends GAlignmentPanel
{
\r
SequenceI s = al.getSequenceAt(i);
\r
\r
{
\r
SequenceI s = al.getSequenceAt(i);
\r
\r
- id = s.getDisplayId(av.getShowDBPrefix(), av.getShowJVSuffix());
\r
+ id = s.getDisplayId(av.getShowJVSuffix());
\r
\r
if (fm.stringWidth(id) > idWidth)
\r
{
\r
\r
if (fm.stringWidth(id) > idWidth)
\r
{
\r
@@
-532,6
+532,13
@@
public class AlignmentPanel extends GAlignmentPanel
{
\r
setScrollValues(av.getStartRes(), av.getStartSeq());
\r
}
\r
{
\r
setScrollValues(av.getStartRes(), av.getStartSeq());
\r
}
\r
+
\r
+
\r
+ if( this.getVisibleRect().getBounds() == g.getClipBounds() )
\r
+ {
\r
+ if (overviewPanel != null)
\r
+ overviewPanel.updateOverviewImage();
\r
+ }
\r
}
\r
\r
/**
\r
}
\r
\r
/**
\r
@@
-672,7
+679,7
@@
public class AlignmentPanel extends GAlignmentPanel
pg.setColor(currentTextColor);
\r
\r
String string = av.getAlignment().getSequenceAt(i).getDisplayId
\r
pg.setColor(currentTextColor);
\r
\r
String string = av.getAlignment().getSequenceAt(i).getDisplayId
\r
- (av.getShowDBPrefix(), av.getShowJVSuffix());
\r
+ ( av.getShowJVSuffix());
\r
\r
pg.drawString(string, 0,
\r
( ( (i - startSeq) * av.charHeight) + av.getCharHeight()) -
\r
\r
pg.drawString(string, 0,
\r
( ( (i - startSeq) * av.charHeight) + av.getCharHeight()) -
\r
@@
-758,7
+765,7
@@
public class AlignmentPanel extends GAlignmentPanel
for (int i = 0; i < av.alignment.getHeight(); i++)
\r
{
\r
SequenceI s = av.alignment.getSequenceAt(i);
\r
for (int i = 0; i < av.alignment.getHeight(); i++)
\r
{
\r
SequenceI s = av.alignment.getSequenceAt(i);
\r
- String string = s.getDisplayId(av.getShowDBPrefix(), av.getShowJVSuffix());
\r
+ String string = s.getDisplayId( av.getShowJVSuffix());
\r
\r
pg.drawString(string, 0,
\r
( (i * av.charHeight) + ypos + av.charHeight) -
\r
\r
pg.drawString(string, 0,
\r
( (i * av.charHeight) + ypos + av.charHeight) -
\r