- if (conv)
- {
- updateCalcs = true;
- av.alignment.addAnnotation(sg.getConservationRow(),0);
- }
- if (cons)
- {
- updateCalcs = true;
- av.alignment.addAnnotation(sg.getConsensus(),0);
- }
- // refresh the annotation rows
- if (updateCalcs)
- {
- sg.recalcConservation();
- }
+ @Override
+ public StructureSelectionManager getStructureSelectionManager()
+ {
+ return av.getStructureSelectionManager();
+ }
+
+ @Override
+ public void raiseOOMWarning(String string, OutOfMemoryError error)
+ {
+ new OOMWarning(string, error, this);
+ }
+
+ public FeatureRenderer cloneFeatureRenderer()
+ {
+
+ return new FeatureRenderer(this);
+ }
+
+ public void updateFeatureRenderer(FeatureRenderer fr)
+ {
+ fr.transferSettings(seqPanel.seqCanvas.getFeatureRenderer());
+ }
+
+ public void updateFeatureRendererFrom(FeatureRenderer fr)
+ {
+ if (seqPanel.seqCanvas.getFeatureRenderer() != null)
+ {
+ seqPanel.seqCanvas.getFeatureRenderer().transferSettings(fr);