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JAL-2386 ensure group conservation shading is applied from slider
[jalview.git]
/
src
/
jalview
/
gui
/
AnnotationLabels.java
diff --git
a/src/jalview/gui/AnnotationLabels.java
b/src/jalview/gui/AnnotationLabels.java
index
3e4ec98
..
8ca1a4e
100755
(executable)
--- a/
src/jalview/gui/AnnotationLabels.java
+++ b/
src/jalview/gui/AnnotationLabels.java
@@
-954,7
+954,7
@@
public class AnnotationLabels extends JPanel implements MouseListener,
int[] alignmentStartEnd = new int[] { 0, ds.getWidth() - 1 };
List<int[]> hiddenCols = av.getAlignment().getHiddenColumns()
int[] alignmentStartEnd = new int[] { 0, ds.getWidth() - 1 };
List<int[]> hiddenCols = av.getAlignment().getHiddenColumns()
- .getListOfCols();
+ .getHiddenRegions();
if (hiddenCols != null)
{
alignmentStartEnd = av.getAlignment().getVisibleStartAndEndIndex(
if (hiddenCols != null)
{
alignmentStartEnd = av.getAlignment().getVisibleStartAndEndIndex(
@@
-971,7
+971,7
@@
public class AnnotationLabels extends JPanel implements MouseListener,
{
hiddenColumns = new ArrayList<int[]>();
for (int[] region : av.getAlignment().getHiddenColumns()
{
hiddenColumns = new ArrayList<int[]>();
for (int[] region : av.getAlignment().getHiddenColumns()
- .getListOfCols())
+ .getHiddenRegions())
{
hiddenColumns.add(new int[] { region[0], region[1] });
}
{
hiddenColumns.add(new int[] { region[0], region[1] });
}