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JAL-3210 Barebones gradle/buildship/eclipse. See README
[jalview.git]
/
src
/
jalview
/
gui
/
AssociatePdbFileWithSeq.java
diff --git
a/src/jalview/gui/AssociatePdbFileWithSeq.java
b/src/jalview/gui/AssociatePdbFileWithSeq.java
index
c380e2f
..
fe0aedf
100644
(file)
--- a/
src/jalview/gui/AssociatePdbFileWithSeq.java
+++ b/
src/jalview/gui/AssociatePdbFileWithSeq.java
@@
-52,8
+52,8
@@
public class AssociatePdbFileWithSeq
PDBEntry entry = new PDBEntry();
StructureFile pdbfile = null;
pdbfile = StructureSelectionManager.getStructureSelectionManager(ssmp)
PDBEntry entry = new PDBEntry();
StructureFile pdbfile = null;
pdbfile = StructureSelectionManager.getStructureSelectionManager(ssmp)
- .setMapping(false, new SequenceI[] { sequence }, null, choice,
- file);
+ .setMapping(false, new SequenceI[]
+ { sequence }, null, choice, file);
if (pdbfile == null)
{
// stacktrace already thrown so just return
if (pdbfile == null)
{
// stacktrace already thrown so just return
@@
-65,11
+65,11
@@
public class AssociatePdbFileWithSeq
if (prompt)
{
if (prompt)
{
- reply = JOptionPane.showInternalInputDialog(Desktop.desktop,
+ reply = JvOptionPane.showInternalInputDialog(Desktop.desktop,
MessageManager
.getString("label.couldnt_find_pdb_id_in_file"),
MessageManager.getString("label.no_pdb_id_in_file"),
MessageManager
.getString("label.couldnt_find_pdb_id_in_file"),
MessageManager.getString("label.no_pdb_id_in_file"),
- JOptionPane.QUESTION_MESSAGE);
+ JvOptionPane.QUESTION_MESSAGE);
}
if (reply == null)
{
}
if (reply == null)
{