+ private void openPairwisePanel(String modelName, SimilarityParamsI params)
+ {
+ ScoreModelI sm = ScoreModels.getInstance().getScoreModel(modelName, af.alignPanel);
+ if (sm==null || !(sm instanceof ScoreMatrix))
+ {
+ return;
+ }
+ JInternalFrame frame = new JInternalFrame();
+ frame.setFrameIcon(null);
+ frame.setContentPane(new PairwiseAlignPanel(af.getViewport(),(ScoreMatrix)sm));
+ Desktop.addInternalFrame(frame,
+ MessageManager.getString("action.pairwise_alignment"), 600,
+ 500);
+ }
+