- String format = new IdentifyFile().Identify(getText(), "Paste");\r
- SequenceI[] sequences = null;\r
-\r
- if (FormatAdapter.isValidFormat(format))\r
- {\r
- try{\r
- sequences = new FormatAdapter().readFile(getText(), "Paste", format);\r
- }catch(java.io.IOException ex)\r
- {\r
- JOptionPane.showInternalMessageDialog(Desktop.desktop,\r
- "Couldn't read the pasted text.\n" +ex.toString(),\r
- "Error parsing text",\r
- JOptionPane.WARNING_MESSAGE);\r
- }\r
- }\r
-\r
- if (sequences != null)\r
- {\r
- if(viewport!=null)\r
- {\r
- for(int i=0; i<sequences.length; i++)\r
- viewport.getAlignment().addSequence(sequences[i]);\r
-\r
- viewport.firePropertyChange("alignment", null, viewport.getAlignment().getSequences());\r
- }\r
- else\r
- {\r
- AlignFrame af = new AlignFrame(new Alignment(sequences));\r
- af.currentFileFormat = format;\r
- Desktop.addInternalFrame(af, "Cut & Paste input - " + format,\r
- AlignFrame.NEW_WINDOW_WIDTH,\r
- AlignFrame.NEW_WINDOW_HEIGHT);\r
- af.statusBar.setText("Successfully pasted alignment file");\r
-\r
- try\r
- {\r
- af.setMaximum(jalview.bin.Cache.getDefault("SHOW_FULLSCREEN", false));\r
- }\r
- catch (Exception ex)\r
- {\r
- }\r
- }\r
- }\r