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constructor only needs GUI container interface
[jalview.git]
/
src
/
jalview
/
gui
/
DasSourceBrowser.java
diff --git
a/src/jalview/gui/DasSourceBrowser.java
b/src/jalview/gui/DasSourceBrowser.java
index
0487c56
..
8ce0995
100755
(executable)
--- a/
src/jalview/gui/DasSourceBrowser.java
+++ b/
src/jalview/gui/DasSourceBrowser.java
@@
-1,5
+1,5
@@
/*
\r
/*
\r
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
\r
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
\r
* Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
\r
*
\r
* This file is part of Jalview.
\r
* Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
\r
*
\r
* This file is part of Jalview.
\r
@@
-107,7
+107,9
@@
public class DasSourceBrowser extends GDasSourceBrowser implements
init();
\r
}
\r
}
\r
init();
\r
}
\r
}
\r
+
\r
FeatureSettings fs = null;
\r
FeatureSettings fs = null;
\r
+
\r
public DasSourceBrowser()
\r
{
\r
this(null);
\r
public DasSourceBrowser()
\r
{
\r
this(null);
\r
@@
-189,11
+191,10
@@
public class DasSourceBrowser extends GDasSourceBrowser implements
text.append("<font color=\"#0000FF\">URL:</font> "
\r
+ dasSources[i].getUrl() + "<br>");
\r
\r
text.append("<font color=\"#0000FF\">URL:</font> "
\r
+ dasSources[i].getUrl() + "<br>");
\r
\r
- text
\r
- .append("<font color=\"#0000FF\">Admin Email:</font> <a href=\"mailto:"
\r
- + dasSources[i].getAdminemail()
\r
- + "\">"
\r
- + dasSources[i].getAdminemail() + "</a>" + "<br>");
\r
+ text.append("<font color=\"#0000FF\">Admin Email:</font> <a href=\"mailto:"
\r
+ + dasSources[i].getAdminemail()
\r
+ + "\">"
\r
+ + dasSources[i].getAdminemail() + "</a>" + "<br>");
\r
\r
text.append("<font color=\"#0000FF\">Registered at:</font> "
\r
+ dasSources[i].getRegisterDate() + "<br>");
\r
\r
text.append("<font color=\"#0000FF\">Registered at:</font> "
\r
+ dasSources[i].getRegisterDate() + "<br>");
\r
@@
-291,7
+292,7
@@
public class DasSourceBrowser extends GDasSourceBrowser implements
\r
private void setParentGuiEnabled(boolean b)
\r
{
\r
\r
private void setParentGuiEnabled(boolean b)
\r
{
\r
- if (fs!=null)
\r
+ if (fs != null)
\r
{
\r
fs.fetchDAS.setEnabled(b);
\r
fs.saveDAS.setEnabled(b);
\r
{
\r
fs.fetchDAS.setEnabled(b);
\r
fs.saveDAS.setEnabled(b);
\r
@@
-587,8
+588,8
@@
public class DasSourceBrowser extends GDasSourceBrowser implements
{
\r
tmp[index] = dasSources[i];
\r
data[index][0] = dasSources[i].getNickname();
\r
{
\r
tmp[index] = dasSources[i];
\r
data[index][0] = dasSources[i].getNickname();
\r
- data[index][1] = new Boolean(selectedSources
\r
- .contains(dasSources[i].getNickname()));
\r
+ data[index][1] = new Boolean(
\r
+ selectedSources.contains(dasSources[i].getNickname()));
\r
index++;
\r
}
\r
}
\r
index++;
\r
}
\r
}
\r
@@
-688,14
+689,13
@@
public class DasSourceBrowser extends GDasSourceBrowser implements
// HAVE COORDINATE SYSTEMS, INFO WHICH AT PRESENT
\r
// IS ADDED FROM THE REGISTRY
\r
names.add(ds.getNickname());
\r
// HAVE COORDINATE SYSTEMS, INFO WHICH AT PRESENT
\r
// IS ADDED FROM THE REGISTRY
\r
names.add(ds.getNickname());
\r
- selected
\r
- .add(new Boolean(selectedSources.contains(ds.getNickname())));
\r
+ selected.add(new Boolean(selectedSources.contains(ds.getNickname())));
\r
continue;
\r
}
\r
\r
if (!selectedInList(dummyFeatureList, ds.getCapabilities())
\r
continue;
\r
}
\r
\r
if (!selectedInList(dummyFeatureList, ds.getCapabilities())
\r
- || !selectedInList(filter3.getSelectedValues(), ds
\r
- .getLabels()))
\r
+ || !selectedInList(filter3.getSelectedValues(),
\r
+ ds.getLabels()))
\r
{
\r
continue;
\r
}
\r
{
\r
continue;
\r
}
\r
@@
-805,8
+805,8
@@
public class DasSourceBrowser extends GDasSourceBrowser implements
}
\r
}
\r
\r
}
\r
}
\r
\r
- properties.setProperty(jalview.bin.Cache.DAS_ACTIVE_SOURCE, sb
\r
- .toString());
\r
+ properties.setProperty(jalview.bin.Cache.DAS_ACTIVE_SOURCE,
\r
+ sb.toString());
\r
\r
if (localSources != null)
\r
{
\r
\r
if (localSources != null)
\r
{
\r
@@
-822,8
+822,8
@@
public class DasSourceBrowser extends GDasSourceBrowser implements
+ ((DasSource) localSources.get(token)).getUrl() + "\t");
\r
}
\r
\r
+ ((DasSource) localSources.get(token)).getUrl() + "\t");
\r
}
\r
\r
- properties.setProperty(jalview.bin.Cache.DAS_LOCAL_SOURCE, sb
\r
- .toString());
\r
+ properties.setProperty(jalview.bin.Cache.DAS_LOCAL_SOURCE,
\r
+ sb.toString());
\r
}
\r
\r
}
\r
}
\r
\r
}
\r
@@
-951,6
+951,7
@@
public class DasSourceBrowser extends GDasSourceBrowser implements
\r
/**
\r
* disable or enable the buttons on the source browser
\r
\r
/**
\r
* disable or enable the buttons on the source browser
\r
+ *
\r
* @param b
\r
*/
\r
public void setGuiEnabled(boolean b)
\r
* @param b
\r
*/
\r
public void setGuiEnabled(boolean b)
\r