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[jalview.git]
/
src
/
jalview
/
gui
/
Finder.java
diff --git
a/src/jalview/gui/Finder.java
b/src/jalview/gui/Finder.java
index
1aceb80
..
e5c94bd
100755
(executable)
--- a/
src/jalview/gui/Finder.java
+++ b/
src/jalview/gui/Finder.java
@@
-87,15
+87,6
@@
public class Finder extends GFinder
});
\r
}
\r
\r
});
\r
}
\r
\r
- /**
\r
- * DOCUMENT ME!
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- *
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- * @param e DOCUMENT ME!
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- */
\r
- public void textfield_actionPerformed(ActionEvent e)
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- {
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- doSearch(false);
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- }
\r
\r
/**
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* DOCUMENT ME!
\r
\r
/**
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* DOCUMENT ME!
\r
@@
-189,7
+180,7
@@
public class Finder extends GFinder
{
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createNewGroup.setEnabled(false);
\r
\r
{
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createNewGroup.setEnabled(false);
\r
\r
- String searchString = textfield.getText().toUpperCase();
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+ String searchString = textfield.getText().toUpperCase().trim();
\r
\r
com.stevesoft.pat.Regex regex = new com.stevesoft.pat.Regex(searchString);
\r
\r
\r
com.stevesoft.pat.Regex regex = new com.stevesoft.pat.Regex(searchString);
\r
\r
@@
-206,19
+197,18
@@
public class Finder extends GFinder
{
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int res = Integer.parseInt(searchString);
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found = true;
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{
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int res = Integer.parseInt(searchString);
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found = true;
\r
-
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- if (av.getSelectionGroup().getSize() > 0)
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+ if (av.getSelectionGroup() == null || av.getSelectionGroup().getSize() < 1)
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{
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{
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- seq = (Sequence) (av.getSelectionGroup().getSequenceAt(0));
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+ seq = (Sequence) av.getAlignment().getSequenceAt(0);
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}
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else
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{
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}
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else
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{
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- seq = (Sequence) av.getAlignment().getSequenceAt(0);
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+ seq = (Sequence) (av.getSelectionGroup().getSequenceAt(0));
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}
\r
\r
searchResults.add(Integer.toString(av.getAlignment().findIndex(seq)));
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}
\r
\r
searchResults.add(Integer.toString(av.getAlignment().findIndex(seq)));
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- searchResults.add(Integer.toString(seq.findIndex(res) - 1));
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- searchResults.add(Integer.toString(seq.findIndex(res) - 1));
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+ searchResults.add(res+"");
\r
+ searchResults.add(res+"");
\r
}
\r
catch (NumberFormatException ex)
\r
{
\r
}
\r
catch (NumberFormatException ex)
\r
{
\r