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JAL-1460 temp variable for clearer conditional and some extra brackets for readabilit...
[jalview.git]
/
src
/
jalview
/
gui
/
IdPanel.java
diff --git
a/src/jalview/gui/IdPanel.java
b/src/jalview/gui/IdPanel.java
index
4ccfb2f
..
f2761ab
100755
(executable)
--- a/
src/jalview/gui/IdPanel.java
+++ b/
src/jalview/gui/IdPanel.java
@@
-138,7
+138,7
@@
public class IdPanel extends JPanel
}
lastid = seq;
}
lastid = seq;
- alignPanel.paintAlignment(false);
+ alignPanel.paintAlignment(false, false);
}
/**
}
/**
@@
-148,24
+148,25
@@
public class IdPanel extends JPanel
public void mouseWheelMoved(MouseWheelEvent e)
{
e.consume();
public void mouseWheelMoved(MouseWheelEvent e)
{
e.consume();
- if (e.getWheelRotation() > 0)
+ double wheelRotation = e.getPreciseWheelRotation();
+ if (wheelRotation > 0)
{
if (e.isShiftDown())
{
av.getRanges().scrollRight(true);
}
{
if (e.isShiftDown())
{
av.getRanges().scrollRight(true);
}
- else if (!av.getWrapAlignment())
+ else
{
av.getRanges().scrollUp(false);
}
}
{
av.getRanges().scrollUp(false);
}
}
- else
+ else if (wheelRotation < 0)
{
if (e.isShiftDown())
{
av.getRanges().scrollRight(false);
}
{
if (e.isShiftDown())
{
av.getRanges().scrollRight(false);
}
- else if (!av.getWrapAlignment())
+ else
{
av.getRanges().scrollUp(true);
}
{
av.getRanges().scrollUp(true);
}
@@
-313,7
+314,7
@@
public class IdPanel extends JPanel
av.isSelectionGroupChanged(true);
av.isSelectionGroupChanged(true);
- alignPanel.paintAlignment(false);
+ alignPanel.paintAlignment(false, false);
}
/**
}
/**
@@
-325,23
+326,19
@@
public class IdPanel extends JPanel
{
int seq2 = alignPanel.getSeqPanel().findSeq(e);
Sequence sq = (Sequence) av.getAlignment().getSequenceAt(seq2);
{
int seq2 = alignPanel.getSeqPanel().findSeq(e);
Sequence sq = (Sequence) av.getAlignment().getSequenceAt(seq2);
- // build a new links menu based on the current links + any non-positional
- // features
+
+ /*
+ * build a new links menu based on the current links
+ * and any non-positional features
+ */
List<String> nlinks = Preferences.sequenceUrlLinks.getLinksForMenu();
List<String> nlinks = Preferences.sequenceUrlLinks.getLinksForMenu();
- SequenceFeature sfs[] = sq == null ? null : sq.getSequenceFeatures();
- if (sfs != null)
+ for (SequenceFeature sf : sq.getFeatures().getNonPositionalFeatures())
{
{
- for (SequenceFeature sf : sfs)
+ if (sf.links != null)
{
{
- if (sf.begin == sf.end && sf.begin == 0)
+ for (String link : sf.links)
{
{
- if (sf.links != null && sf.links.size() > 0)
- {
- for (int l = 0, lSize = sf.links.size(); l < lSize; l++)
- {
- nlinks.add(sf.links.elementAt(l));
- }
- }
+ nlinks.add(link);
}
}
}
}
}
}
@@
-511,7
+508,7
@@
public class IdPanel extends JPanel
running = false;
}
running = false;
}
- alignPanel.paintAlignment(false);
+ alignPanel.paintAlignment(false, false);
try
{
try
{