+ /* if(ap.av.alignment.getAlignmentAnnotation()!=null)
+ {
+ for(int i=0; i<ap.av.alignment.getAlignmentAnnotation().length; i++)
+ {
+ if(!ap.av.alignment.getAlignmentAnnotation()[i].autoCalculated)
+ {
+ af.alignPanel.av.alignment.getAlignmentAnnotation()[i] =
+ ap.av.alignment.getAlignmentAnnotation()[i];
+ }
+ }
+ } */
+