git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
Display description
[jalview.git]
/
src
/
jalview
/
gui
/
OverviewPanel.java
diff --git
a/src/jalview/gui/OverviewPanel.java
b/src/jalview/gui/OverviewPanel.java
index
714eec6
..
fd3c334
100755
(executable)
--- a/
src/jalview/gui/OverviewPanel.java
+++ b/
src/jalview/gui/OverviewPanel.java
@@
-1,6
+1,6
@@
/*
\r
* Jalview - A Sequence Alignment Editor and Viewer
\r
/*
\r
* Jalview - A Sequence Alignment Editor and Viewer
\r
- * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
\r
+ * Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
\r
*
\r
* This program is free software; you can redistribute it and/or
\r
* modify it under the terms of the GNU General Public License
\r
*
\r
* This program is free software; you can redistribute it and/or
\r
* modify it under the terms of the GNU General Public License
\r
@@
-281,11
+281,9
@@
public class OverviewPanel extends JPanel implements Runnable
seq = av.alignment.getHiddenSequences().getHiddenSequence(lastrow);
\r
if (seq == null)
\r
{
\r
seq = av.alignment.getHiddenSequences().getHiddenSequence(lastrow);
\r
if (seq == null)
\r
{
\r
-
\r
int index =
\r
av.alignment.getHiddenSequences().findIndexWithoutHiddenSeqs(lastrow);
\r
\r
int index =
\r
av.alignment.getHiddenSequences().findIndexWithoutHiddenSeqs(lastrow);
\r
\r
-
\r
seq = av.alignment.getSequenceAt(index);
\r
}
\r
else
\r
seq = av.alignment.getSequenceAt(index);
\r
}
\r
else
\r
@@
-319,7
+317,7
@@
public class OverviewPanel extends JPanel implements Runnable
seq, lastcol).getRGB();
\r
\r
if (av.showSequenceFeatures)
\r
seq, lastcol).getRGB();
\r
\r
if (av.showSequenceFeatures)
\r
- color = fr.findFeatureColour(color, lastrow, lastcol);
\r
+ color = fr.findFeatureColour(color, seq, lastcol);
\r
}
\r
else
\r
{
\r
}
\r
else
\r
{
\r