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No need for minorSpacing
[jalview.git]
/
src
/
jalview
/
gui
/
PairwiseAlignPanel.java
diff --git
a/src/jalview/gui/PairwiseAlignPanel.java
b/src/jalview/gui/PairwiseAlignPanel.java
index
6509063
..
31efd84
100755
(executable)
--- a/
src/jalview/gui/PairwiseAlignPanel.java
+++ b/
src/jalview/gui/PairwiseAlignPanel.java
@@
-77,7
+77,7
@@
public class PairwiseAlignPanel extends GPairwiseAlignPanel
(SequenceI) selsubset.elementAt(j), "pep");
\r
as.calcScoreMatrix();
\r
as.traceAlignment();
\r
(SequenceI) selsubset.elementAt(j), "pep");
\r
as.calcScoreMatrix();
\r
as.traceAlignment();
\r
- as.printAlignment();
\r
+ as.printAlignment(System.out);
\r
scores[i][j] = (float) as.getMaxScore() / (float) as.getASeq1().length;
\r
totscore = totscore + scores[i][j];
\r
\r
scores[i][j] = (float) as.getMaxScore() / (float) as.getASeq1().length;
\r
totscore = totscore + scores[i][j];
\r
\r