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Merge branch 'develop' into efficiency/JAL-2034_JAL-1421
[jalview.git]
/
src
/
jalview
/
gui
/
SequenceRenderer.java
diff --git
a/src/jalview/gui/SequenceRenderer.java
b/src/jalview/gui/SequenceRenderer.java
index
b67b88f
..
64fe053
100755
(executable)
--- a/
src/jalview/gui/SequenceRenderer.java
+++ b/
src/jalview/gui/SequenceRenderer.java
@@
-29,12
+29,6
@@
import java.awt.Color;
import java.awt.FontMetrics;
import java.awt.Graphics;
import java.awt.FontMetrics;
import java.awt.Graphics;
-/**
- * DOCUMENT ME!
- *
- * @author $author$
- * @version $Revision$
- */
public class SequenceRenderer implements jalview.api.SequenceRenderer
{
final static int CHAR_TO_UPPER = 'A' - 'a';
public class SequenceRenderer implements jalview.api.SequenceRenderer
{
final static int CHAR_TO_UPPER = 'A' - 'a';
@@
-91,6
+85,7
@@
public class SequenceRenderer implements jalview.api.SequenceRenderer
@Override
public Color getResidueBoxColour(SequenceI seq, int i)
{
@Override
public Color getResidueBoxColour(SequenceI seq, int i)
{
+ // rate limiting step when rendering overview for lots of groups
allGroups = av.getAlignment().findAllGroups(seq);
if (inCurrentSequenceGroup(i))
allGroups = av.getAlignment().findAllGroups(seq);
if (inCurrentSequenceGroup(i))