StructureSelectionManager ssm, StructureChooser sc,
AlignmentPanel ap, SequenceI seq, boolean prompt,
String sFilename, TFType tft, String paeFilename,
boolean forceHeadless, boolean showRefAnnotations,
boolean doXferSettings, ViewerType viewerType)
{
StructureSelectionManager ssm, StructureChooser sc,
AlignmentPanel ap, SequenceI seq, boolean prompt,
String sFilename, TFType tft, String paeFilename,
boolean forceHeadless, boolean showRefAnnotations,
boolean doXferSettings, ViewerType viewerType)
{