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Corrected hidden row feature render bug
[jalview.git]
/
src
/
jalview
/
gui
/
TreeCanvas.java
diff --git
a/src/jalview/gui/TreeCanvas.java
b/src/jalview/gui/TreeCanvas.java
index
944aa73
..
1628f58
100755
(executable)
--- a/
src/jalview/gui/TreeCanvas.java
+++ b/
src/jalview/gui/TreeCanvas.java
@@
-228,7
+228,7
@@
public class TreeCanvas extends JPanel implements MouseListener, Runnable,
SequenceGroup selected = av.getSelectionGroup();
\r
\r
if ((selected != null) &&
\r
SequenceGroup selected = av.getSelectionGroup();
\r
\r
if ((selected != null) &&
\r
- selected.sequences.contains((SequenceI) node.element()))
\r
+ selected.getSequences(false).contains((SequenceI) node.element()))
\r
{
\r
g.setColor(Color.gray);
\r
\r
{
\r
g.setColor(Color.gray);
\r
\r
@@
-758,7
+758,8
@@
public class TreeCanvas extends JPanel implements MouseListener, Runnable,
&& av.getGlobalColourScheme().conservationApplied())
\r
{
\r
Conservation c = new Conservation("Group",
\r
&& av.getGlobalColourScheme().conservationApplied())
\r
{
\r
Conservation c = new Conservation("Group",
\r
- ResidueProperties.propHash, 3, sg.sequences,
\r
+ ResidueProperties.propHash, 3,
\r
+ sg.getSequences(false),
\r
sg.getStartRes(), sg.getEndRes());
\r
\r
c.calculate();
\r
sg.getStartRes(), sg.getEndRes());
\r
\r
c.calculate();
\r