- * Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
*
* This program is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
*
* This program is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
// Draw horizontal line
g.drawLine(xstart, ypos, xend, ypos);
if (node == highlightNode)
// Draw horizontal line
g.drawLine(xstart, ypos, xend, ypos);
if (node == highlightNode)
g.fillRect(xend - 3, ypos - 3, 6, 6);
g.fillRect(xend - 3, ypos - 3, 6, 6);
g.fillRect(xend - 2, ypos - 2, 4, 4);
g.fillRect(xend - 2, ypos - 2, 4, 4);
cs = ColourSchemeProperty.getColour(sequences,
av.alignment.getWidth(),
ColourSchemeProperty.
getColourName(
av.getGlobalColourScheme()));
cs = ColourSchemeProperty.getColour(sequences,
av.alignment.getWidth(),
ColourSchemeProperty.
getColourName(
av.getGlobalColourScheme()));
cs.setThreshold(av.getGlobalColourScheme().getThreshold(),
av.getIgnoreGapsConsensus());
cs.setThreshold(av.getGlobalColourScheme().getThreshold(),
av.getIgnoreGapsConsensus());