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JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix delegate of
[jalview.git]
/
src
/
jalview
/
gui
/
TreePanel.java
diff --git
a/src/jalview/gui/TreePanel.java
b/src/jalview/gui/TreePanel.java
index
7df1f71
..
13e2360
100755
(executable)
--- a/
src/jalview/gui/TreePanel.java
+++ b/
src/jalview/gui/TreePanel.java
@@
-23,7
+23,7
@@
package jalview.gui;
import jalview.analysis.AlignmentSorter;
import jalview.analysis.NJTree;
import jalview.analysis.scoremodels.ScoreModels;
import jalview.analysis.AlignmentSorter;
import jalview.analysis.NJTree;
import jalview.analysis.scoremodels.ScoreModels;
-import jalview.api.analysis.ScoreModelI;
+import jalview.api.analysis.DistanceModelI;
import jalview.api.analysis.ViewBasedAnalysisI;
import jalview.bin.Cache;
import jalview.commands.CommandI;
import jalview.api.analysis.ViewBasedAnalysisI;
import jalview.bin.Cache;
import jalview.commands.CommandI;
@@
-300,7
+300,7
@@
public class TreePanel extends GTreePanel
seqs = av.getSelectionGroup().getSequencesInOrder(
av.getAlignment());
}
seqs = av.getSelectionGroup().getSequencesInOrder(
av.getAlignment());
}
- ScoreModelI sm = ScoreModels.getInstance().forName(pwtype);
+ DistanceModelI sm = ScoreModels.getInstance().forName(pwtype);
if (sm instanceof ViewBasedAnalysisI)
{
try
if (sm instanceof ViewBasedAnalysisI)
{
try