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JAL-2629 for multi-job hmmbuilds, group names are now the HMM names
[jalview.git]
/
src
/
jalview
/
hmmer
/
HMMERParamStore.java
diff --git
a/src/jalview/hmmer/HMMERParamStore.java
b/src/jalview/hmmer/HMMERParamStore.java
index
b512ce1
..
11cde90
100644
(file)
--- a/
src/jalview/hmmer/HMMERParamStore.java
+++ b/
src/jalview/hmmer/HMMERParamStore.java
@@
-6,7
+6,6
@@
import jalview.gui.Preferences;
import jalview.util.MessageManager;
import jalview.ws.params.ArgumentI;
import jalview.ws.params.ParamDatastoreI;
import jalview.util.MessageManager;
import jalview.ws.params.ArgumentI;
import jalview.ws.params.ParamDatastoreI;
-import jalview.ws.params.ValueConstrainI;
import jalview.ws.params.WsParamSetI;
import jalview.ws.params.simple.BooleanOption;
import jalview.ws.params.simple.IntegerParameter;
import jalview.ws.params.WsParamSetI;
import jalview.ws.params.simple.BooleanOption;
import jalview.ws.params.simple.IntegerParameter;
@@
-157,29
+156,17
@@
public class HMMERParamStore implements ParamDatastoreI
MessageManager.getString("label.use_reference"),
MessageManager.getString("label.use_reference_desc"), true,
true, true, null));
MessageManager.getString("label.use_reference"),
MessageManager.getString("label.use_reference_desc"), true,
true, true, null));
- }
-
- private class StringValueConstrain implements ValueConstrainI
- {
-
- @Override
- public ValueType getType()
- {
- return ValueType.String;
- }
- @Override
- public Number getMax()
- {
- return null;
- }
-
- @Override
- public Number getMin()
- {
- return null;
- }
+ Collection<String> options = new ArrayList<>();
+ options.add(MessageManager.getString("label.alignment"));
+ options.add(MessageManager.getString("label.groups_and_alignment"));
+ options.add(MessageManager.getString("label.groups"));
+ options.add(MessageManager.getString("label.selected_group"));
+ args.add(new Option(MessageManager.getString("label.hmmbuild_for"),
+ MessageManager.getString("label.hmmbuild_for_desc"), true,
+ MessageManager.getString("label.alignment"),
+ MessageManager.getString("label.alignment"), options, null));
}
@Override
}
@Override