- String str = scanner.next();
- str = scanner.next();
- addScoreAnnotation(str, seq, "jackhmmer E-value",
- "Full sequence E-value", pp);
- str = scanner.next();
- addScoreAnnotation(str, seq, "jackhmmer Score",
- "Full sequence bit score", pp);
- seq.removeAlignmentAnnotation(pp);
+ String evalue = scanner.next();
+ evalue = scanner.next();
+ String score = scanner.next();
+ addScoreAnnotations(evalue, score, seq);