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JAL-2999 release date for 2.10.4b1 set for 27th May 2018
[jalview.git]
/
src
/
jalview
/
io
/
AMSAFile.java
diff --git
a/src/jalview/io/AMSAFile.java
b/src/jalview/io/AMSAFile.java
index
798249f
..
34eace4
100644
(file)
--- a/
src/jalview/io/AMSAFile.java
+++ b/
src/jalview/io/AMSAFile.java
@@
-24,6
+24,8
@@
import jalview.datamodel.AlignmentAnnotation;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.SequenceI;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.SequenceI;
+import java.io.IOException;
+
public class AMSAFile extends jalview.io.FastaFile
{
public class AMSAFile extends jalview.io.FastaFile
{
@@
-37,11
+39,23
@@
public class AMSAFile extends jalview.io.FastaFile
this.al = al;
}
this.al = al;
}
+ public AMSAFile(String inFile, DataSourceType sourceType)
+ throws IOException
+ {
+ super(inFile, sourceType);
+ }
+
+ public AMSAFile(FileParse source) throws IOException
+ {
+ super(source);
+ }
+
/**
* DOCUMENT ME!
*
* @return DOCUMENT ME!
*/
/**
* DOCUMENT ME!
*
* @return DOCUMENT ME!
*/
+ @Override
public String print(SequenceI[] sqs, boolean jvsuffix)
{
super.print(sqs, jvsuffix);
public String print(SequenceI[] sqs, boolean jvsuffix)
{
super.print(sqs, jvsuffix);