git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
JAL-2691 catchall if passed dataset sequences (tests only)
[jalview.git]
/
src
/
jalview
/
io
/
AlignFile.java
diff --git
a/src/jalview/io/AlignFile.java
b/src/jalview/io/AlignFile.java
index
7333075
..
a603cca
100755
(executable)
--- a/
src/jalview/io/AlignFile.java
+++ b/
src/jalview/io/AlignFile.java
@@
-40,8
+40,8
@@
import java.util.Vector;
* @author $author$
* @version $Revision$
*/
* @author $author$
* @version $Revision$
*/
-public abstract class AlignFile extends FileParse implements
- AlignmentFileReaderI, AlignmentFileWriterI
+public abstract class AlignFile extends FileParse
+ implements AlignmentFileReaderI, AlignmentFileWriterI
{
int noSeqs = 0;
{
int noSeqs = 0;
@@
-118,8
+118,7
@@
public abstract class AlignFile extends FileParse implements
* @throws IOException
*/
public AlignFile(boolean parseImmediately, String dataObject,
* @throws IOException
*/
public AlignFile(boolean parseImmediately, String dataObject,
- DataSourceType sourceType)
- throws IOException
+ DataSourceType sourceType) throws IOException
{
super(dataObject, sourceType);
initData();
{
super(dataObject, sourceType);
initData();
@@
-282,9
+281,8
@@
public abstract class AlignFile extends FileParse implements
{
if (key == null)
{
{
if (key == null)
{
- throw new Error(
- MessageManager
- .getString("error.implementation_error_cannot_have_null_alignment"));
+ throw new Error(MessageManager.getString(
+ "error.implementation_error_cannot_have_null_alignment"));
}
if (value == null)
{
}
if (value == null)
{