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JAL-1499 initial tests working, can export to / import from textbox ok
[jalview.git]
/
src
/
jalview
/
io
/
AppletFormatAdapter.java
diff --git
a/src/jalview/io/AppletFormatAdapter.java
b/src/jalview/io/AppletFormatAdapter.java
index
d2d607b
..
4b7e26e
100755
(executable)
--- a/
src/jalview/io/AppletFormatAdapter.java
+++ b/
src/jalview/io/AppletFormatAdapter.java
@@
-636,10
+636,12
@@
public class AppletFormatAdapter
}
else
{
}
else
{
+ // MC this is pointless? Only performed if viewpanel.getAlignment() ==
+ // alignment i.e. the same case as the if condition
afile.setSeqs(viewpanel.getAlignment().getSequencesArray());
}
afile.setSeqs(viewpanel.getAlignment().getSequencesArray());
}
- String afileresp = afile.print();
+ String afileresp = afile.print(alignment);
if (afile.hasWarningMessage())
{
System.err.println("Warning raised when writing as " + format
if (afile.hasWarningMessage())
{
System.err.println("Warning raised when writing as " + format