- newSeq.setSequence( seqhash.get(headers.elementAt(i).toString()).toString() );\r
-\r
- if (!isValidProteinSequence(newSeq.getSequence()))\r
- {\r
- throw new IOException(AppletFormatAdapter.INVALID_CHARACTERS\r
- + " : " + newSeq.getName()\r
- + " : " + invalidCharacter);\r
- }\r
-\r