- // This is the Viewd alignment sequences\r
- // No need to tell the user of the dataset updates\r
- if ( (seq2.getStart() != absStart+sequence.getStart())\r
- || (seq2.getEnd() != absEnd+sequence.getStart()))\r
- {\r
- sbuffer.append("Updated: " + seq2.getName() + " " +\r
- seq2.getStart() + "/" + seq2.getEnd() +\r
- " to " + (absStart + sequence.getStart()) + "/" +\r
- (absEnd + sequence.getStart()) + "\n");\r
-\r
- seq2.setStart(absStart + sequence.getStart());\r
- seq2.setEnd(absEnd + sequence.getStart());\r
- }\r
- }\r