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JAL-629 More NG arguments: --features, --annotations, --sortbytree, --tree, --groovy...
[jalview.git]
/
src
/
jalview
/
io
/
FileFormat.java
diff --git
a/src/jalview/io/FileFormat.java
b/src/jalview/io/FileFormat.java
index
b701963
..
43c6dcf
100644
(file)
--- a/
src/jalview/io/FileFormat.java
+++ b/
src/jalview/io/FileFormat.java
@@
-30,7
+30,7
@@
import jalview.structure.StructureImportSettings;
public enum FileFormat implements FileFormatI
{
public enum FileFormat implements FileFormatI
{
- Fasta("Fasta", "fa, fasta, mfa, fastq", true, true)
+ Fasta("Fasta", "fa,fasta,mfa,fastq", true, true)
{
@Override
public AlignmentFileReaderI getReader(FileParse source)
{
@Override
public AlignmentFileReaderI getReader(FileParse source)
@@
-92,7
+92,7
@@
public enum FileFormat implements FileFormatI
return new PIRFile();
}
},
return new PIRFile();
}
},
- BLC("BLC", "BLC", true, true)
+ BLC("BLC", "blc", true, true)
{
@Override
public AlignmentFileReaderI getReader(FileParse source)
{
@Override
public AlignmentFileReaderI getReader(FileParse source)
@@
-244,7
+244,7
@@
public enum FileFormat implements FileFormatI
return new PhylipFile();
}
},
return new PhylipFile();
}
},
- GenBank("GenBank Flatfile", "gb, gbk", true, false)
+ GenBank("GenBank Flatfile", "gb,gbk", true, false)
{
@Override
public AlignmentFileReaderI getReader(FileParse source)
{
@Override
public AlignmentFileReaderI getReader(FileParse source)
@@
-379,7
+379,7
@@
public enum FileFormat implements FileFormatI
return true;
}
},
return true;
}
},
- Jalview("Jalview", "jvp, jar", true, true)
+ Jalview("Jalview", "jvp,jar", true, true)
{
@Override
public AlignmentFileReaderI getReader(FileParse source)
{
@Override
public AlignmentFileReaderI getReader(FileParse source)