- .getSequenceAt(alignment.getAbsoluteHeight() - 1);
- alignment.deleteSequence(alignment.getAbsoluteHeight() - 1);
- SequenceGroup sg = viewport.getSelectionGroup();
- if (sg != null)
- {
- seq.insertCharAt(0, sg.getStartRes(), '-');
- seq.insertCharAt(sg.getEndRes() + 1,
- alignment.getWidth() - sg.getEndRes(), '-');
- SequenceI topSeq = sg.getSequencesInOrder(alignment)[0];
- int topIndex = alignment.findIndex(topSeq);
- alignment.insertSequenceAt(topIndex, seq);
- sg.setSeqrep(seq);
- viewport.getSelectionGroup().addSequence(seq, false);
- }
- else