git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
JAL-653 first stab at parsing GFF3 pragmas to support ##fasta
[jalview.git]
/
src
/
jalview
/
io
/
FileParse.java
diff --git
a/src/jalview/io/FileParse.java
b/src/jalview/io/FileParse.java
index
69c362f
..
f9c717d
100755
(executable)
--- a/
src/jalview/io/FileParse.java
+++ b/
src/jalview/io/FileParse.java
@@
-20,6
+20,7
@@
*/
package jalview.io;
*/
package jalview.io;
+import jalview.api.AlignViewportI;
import jalview.util.MessageManager;
import java.io.BufferedReader;
import jalview.util.MessageManager;
import java.io.BufferedReader;
@@
-48,6
+49,8
@@
public class FileParse
public File inFile = null;
public File inFile = null;
+ private AlignViewportI viewport;
+
public int index = 1; // sequence counter for FileParse object created from
// same data source
public int index = 1; // sequence counter for FileParse object created from
// same data source
@@
-488,4
+491,14
@@
public class FileParse
}
return null;
}
}
return null;
}
+
+ public AlignViewportI getViewport()
+ {
+ return viewport;
+ }
+
+ public void setViewport(AlignViewportI viewport)
+ {
+ this.viewport = viewport;
+ }
}
}