+\r
+ public String formatSequences(String format,\r
+ SequenceI [] seqs,\r
+ String [] omitHiddenColumns)\r
+ {\r
+ if(omitHiddenColumns!=null)\r
+ {\r
+ SequenceI [] tmp = new SequenceI[seqs.length];\r
+ for(int i=0; i<seqs.length; i++)\r
+ tmp [i] = new Sequence(\r
+ seqs[i].getName(), omitHiddenColumns[i],\r
+ seqs[i].getStart(), seqs[i].getEnd());\r
+\r
+ seqs = tmp;\r
+ }\r
+\r
+ return formatSequences(format, seqs);\r
+ }\r
+\r
+\r