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JAL-2446 optimised new method to find feature colour for overview
[jalview.git]
/
src
/
jalview
/
io
/
FormatAdapter.java
diff --git
a/src/jalview/io/FormatAdapter.java
b/src/jalview/io/FormatAdapter.java
index
ce584f2
..
d9dd79d
100755
(executable)
--- a/
src/jalview/io/FormatAdapter.java
+++ b/
src/jalview/io/FormatAdapter.java
@@
-258,8
+258,8
@@
public class FormatAdapter extends AppletFormatAdapter
selectedOnly);
}
selectedOnly);
}
- public AlignmentI readFromFile(AlignmentFileI source, FileFormatI format)
- throws IOException
+ public AlignmentI readFromFile(AlignmentFileReaderI source,
+ FileFormatI format) throws IOException
{
FileParse fp = new FileParse(source.getInFile(),
source.getDataSourceType());
{
FileParse fp = new FileParse(source.getInFile(),
source.getDataSourceType());