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patch for NPE (not clear if NPE is evidence of deeper bug in feature renderer state)
[jalview.git]
/
src
/
jalview
/
io
/
PfamFile.java
diff --git
a/src/jalview/io/PfamFile.java
b/src/jalview/io/PfamFile.java
index
8ba1f6e
..
14debd4
100755
(executable)
--- a/
src/jalview/io/PfamFile.java
+++ b/
src/jalview/io/PfamFile.java
@@
-1,5
+1,5
@@
/*
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
* Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
*
* This file is part of Jalview.
* Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
*
* This file is part of Jalview.
@@
-160,11
+160,12
@@
public class PfamFile extends AlignFile
{
out.append(new Format("%-" + maxid + "s").form(printId(s[j]) + " "));
{
out.append(new Format("%-" + maxid + "s").form(printId(s[j]) + " "));
- out.append(s[j].getSequenceAsString() + "\n");
+ out.append(s[j].getSequenceAsString());
+ out.append(newline);
j++;
}
j++;
}
- out.append("\n");
+ out.append(newline);
return out.toString();
}
return out.toString();
}