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[jalview.git]
/
src
/
jalview
/
io
/
PileUpfile.java
diff --git
a/src/jalview/io/PileUpfile.java
b/src/jalview/io/PileUpfile.java
index
571c469
..
9c8815e
100755
(executable)
--- a/
src/jalview/io/PileUpfile.java
+++ b/
src/jalview/io/PileUpfile.java
@@
-83,7
+83,7
@@
public class PileUpfile extends MSFfile
StringBuffer out = new StringBuffer("PileUp");
out.append(newline);
out.append(newline);
StringBuffer out = new StringBuffer("PileUp");
out.append(newline);
out.append(newline);
-
+
int max = 0;
int maxid = 0;
int max = 0;
int maxid = 0;
@@
-98,8
+98,7
@@
public class PileUpfile extends MSFfile
}
out.append(" MSF: " + s[0].getSequence().length
}
out.append(" MSF: " + s[0].getSequence().length
- + " Type: P Check: " + bigChecksum % 10000
- + " ..");
+ + " Type: P Check: " + bigChecksum % 10000 + " ..");
out.append(newline);
out.append(newline);
out.append(newline);
out.append(newline);
out.append(newline);
out.append(newline);
@@
-131,8
+130,11
@@
public class PileUpfile extends MSFfile
}
maxid++;
}
maxid++;
- out.append(newline);out.append(newline);out.append("//");
- out.append(newline);out.append(newline);
+ out.append(newline);
+ out.append(newline);
+ out.append("//");
+ out.append(newline);
+ out.append(newline);
int len = 50;
int len = 50;