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Merge commit 'alpha/update_2_12_for_2_11_2_series_merge^2' into HEAD
[jalview.git]
/
src
/
jalview
/
io
/
SequenceAnnotationReport.java
diff --git
a/src/jalview/io/SequenceAnnotationReport.java
b/src/jalview/io/SequenceAnnotationReport.java
index
d5c3ed3
..
6936686
100644
(file)
--- a/
src/jalview/io/SequenceAnnotationReport.java
+++ b/
src/jalview/io/SequenceAnnotationReport.java
@@
-20,6
+20,8
@@
*/
package jalview.io;
*/
package jalview.io;
+import java.util.Locale;
+
import java.util.Collection;
import java.util.Comparator;
import java.util.LinkedHashMap;
import java.util.Collection;
import java.util.Comparator;
import java.util.LinkedHashMap;
@@
-274,7
+276,7
@@
public class SequenceAnnotationReport
* truncate overlong descriptions unless they contain an href
* before the truncation point (as truncation could leave corrupted html)
*/
* truncate overlong descriptions unless they contain an href
* before the truncation point (as truncation could leave corrupted html)
*/
- int linkindex = description.toLowerCase().indexOf("<a ");
+ int linkindex = description.toLowerCase(Locale.ROOT).indexOf("<a ");
boolean hasLink = linkindex > -1
&& linkindex < MAX_DESCRIPTION_LENGTH;
if (
boolean hasLink = linkindex > -1
&& linkindex < MAX_DESCRIPTION_LENGTH;
if (
@@
-403,8
+405,8
@@
public class SequenceAnnotationReport
+ "\" target=\""
+ urllink.get(0)
+ "\">"
+ "\" target=\""
+ urllink.get(0)
+ "\">"
- + (urllink.get(0).toLowerCase()
- .equals(urllink.get(1).toLowerCase()) ? urllink
+ + (urllink.get(0).toLowerCase(Locale.ROOT)
+ .equals(urllink.get(1).toLowerCase(Locale.ROOT)) ? urllink
.get(0) : (urllink.get(0) + ":" + urllink
.get(1)))
+ "</a><br>");
.get(0) : (urllink.get(0) + ":" + urllink
.get(1)))
+ "</a><br>");