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Merge branch 'develop' into improvement/JAL-3783_upgrade_to_groovy-4
[jalview.git]
/
src
/
jalview
/
io
/
SimpleBlastFile.java
diff --git
a/src/jalview/io/SimpleBlastFile.java
b/src/jalview/io/SimpleBlastFile.java
index
ba6b2f3
..
d8b3215
100644
(file)
--- a/
src/jalview/io/SimpleBlastFile.java
+++ b/
src/jalview/io/SimpleBlastFile.java
@@
-165,7
+165,7
@@
public class SimpleBlastFile extends AlignFile
rstart = Long.parseLong(stindx);
} catch (Exception e)
{
rstart = Long.parseLong(stindx);
} catch (Exception e)
{
- System.err.println(
+ jalview.bin.Console.errPrintln(
"Couldn't parse '" + stindx + "' as start of row");
// inAlignments = false;
// warn for this line
"Couldn't parse '" + stindx + "' as start of row");
// inAlignments = false;
// warn for this line
@@
-175,7
+175,7
@@
public class SimpleBlastFile extends AlignFile
rend = Long.parseLong(endindx);
} catch (Exception e)
{
rend = Long.parseLong(endindx);
} catch (Exception e)
{
- System.err.println(
+ jalview.bin.Console.errPrintln(
"Couldn't parse '" + endindx + "' as end of row");
// inAlignments = false;
"Couldn't parse '" + endindx + "' as end of row");
// inAlignments = false;