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JAL-2507 unpaired RNA marked as ‘ ‘ in Stockholm SS line
[jalview.git]
/
src
/
jalview
/
io
/
StockholmFile.java
diff --git
a/src/jalview/io/StockholmFile.java
b/src/jalview/io/StockholmFile.java
index
32e6ff7
..
c2726a7
100644
(file)
--- a/
src/jalview/io/StockholmFile.java
+++ b/
src/jalview/io/StockholmFile.java
@@
-1084,8
+1084,8
@@
public class StockholmFile extends AlignFile
{
if (annot == null)
{
{
if (annot == null)
{
- // sensible gap character if one is available or make one up
- return sequenceI == null ? '-' : sequenceI.getCharAt(k);
+ // sensible gap character
+ return ' ';
}
else
{
}
else
{