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Merge branch 'develop' into improvement/JAL-4124_dont_duplacate_PAE_data_acrossviews
[jalview.git]
/
src
/
jalview
/
io
/
vamsas
/
Tree.java
diff --git
a/src/jalview/io/vamsas/Tree.java
b/src/jalview/io/vamsas/Tree.java
index
f6d17d4
..
a6dd8b6
100644
(file)
--- a/
src/jalview/io/vamsas/Tree.java
+++ b/
src/jalview/io/vamsas/Tree.java
@@
-415,7
+415,7
@@
public class Tree extends DatastoreItem
}
else
{
}
else
{
- System.err.println("WARNING: Unassociated treeNode "
+ jalview.bin.Console.errPrintln("WARNING: Unassociated treeNode "
+ tnode.element().toString() + " "
+ ((tnode.getName() != null)
? " label " + tnode.getName()
+ tnode.element().toString() + " "
+ ((tnode.getName() != null)
? " label " + tnode.getName()
@@
-466,7
+466,7
@@
public class Tree extends DatastoreItem
occurence = Integer.valueOf(oval).intValue();
} catch (Exception e)
{
occurence = Integer.valueOf(oval).intValue();
} catch (Exception e)
{
- System.err.println("Invalid nodespec '" + nodespec + "'");
+ jalview.bin.Console.errPrintln("Invalid nodespec '" + nodespec + "'");
return null;
}
jalview.datamodel.BinaryNode bn = null;
return null;
}
jalview.datamodel.BinaryNode bn = null;