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JAL-4090 JAL-1551 spotlessApply
[jalview.git]
/
src
/
jalview
/
io
/
vcf
/
VCFLoader.java
diff --git
a/src/jalview/io/vcf/VCFLoader.java
b/src/jalview/io/vcf/VCFLoader.java
index
c3fbea8
..
9179b79
100644
(file)
--- a/
src/jalview/io/vcf/VCFLoader.java
+++ b/
src/jalview/io/vcf/VCFLoader.java
@@
-278,7
+278,8
@@
public class VCFLoader
initialise(vcfFile);
} catch (IOException e)
{
initialise(vcfFile);
} catch (IOException e)
{
- jalview.bin.Console.errPrintln("Error opening VCF file: " + e.getMessage());
+ jalview.bin.Console
+ .errPrintln("Error opening VCF file: " + e.getMessage());
}
// map of species!chromosome!fromAssembly!toAssembly to {fromRange, toRange}
}
// map of species!chromosome!fromAssembly!toAssembly to {fromRange, toRange}
@@
-398,7
+399,8
@@
public class VCFLoader
}
} catch (Throwable e)
{
}
} catch (Throwable e)
{
- jalview.bin.Console.errPrintln("Error processing VCF: " + e.getMessage());
+ jalview.bin.Console
+ .errPrintln("Error processing VCF: " + e.getMessage());
e.printStackTrace();
if (gui != null)
{
e.printStackTrace();
if (gui != null)
{