git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
Use visible id for sorting
[jalview.git]
/
src
/
jalview
/
jbgui
/
GFinder.java
diff --git
a/src/jalview/jbgui/GFinder.java
b/src/jalview/jbgui/GFinder.java
index
8ece84d
..
ed03a80
100755
(executable)
--- a/
src/jalview/jbgui/GFinder.java
+++ b/
src/jalview/jbgui/GFinder.java
@@
-24,8
+24,6
@@
import javax.swing.*;
import javax.swing.event.*;
\r
import jalview.io.FormatAdapter;
\r
import jalview.datamodel.SequenceI;
\r
import javax.swing.event.*;
\r
import jalview.io.FormatAdapter;
\r
import jalview.datamodel.SequenceI;
\r
-import java.awt.datatransfer.DataFlavor;
\r
-import jalview.io.IdentifyFile;
\r
\r
public class GFinder
\r
extends JPanel
\r
\r
public class GFinder
\r
extends JPanel
\r
@@
-166,7
+164,7
@@
public class GFinder
public void run()
\r
{
\r
String str = textfield.getText();
\r
public void run()
\r
{
\r
String str = textfield.getText();
\r
- SequenceI[] sequences = FormatAdapter.readFile(str, "Paste", "FASTA");
\r
+ SequenceI[] sequences = new FormatAdapter().readFile(str, "Paste", "FASTA");
\r
if(sequences!=null && sequences.length>0)
\r
{
\r
str = jalview.analysis.AlignSeq.extractGaps(
\r
if(sequences!=null && sequences.length>0)
\r
{
\r
str = jalview.analysis.AlignSeq.extractGaps(
\r