+ resetButton.setFont(new java.awt.Font("Verdana", 0, 12));
+ resetButton.setText("Reset");
+ resetButton.addActionListener(new java.awt.event.ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ resetButton_actionPerformed(e);
+ }
+ });
+ fileMenu.setText("File");
+ saveMenu.setText("Save as");
+ eps.setText("EPS");
+ eps.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ eps_actionPerformed(e);
+ }
+ });
+ png.setText("PNG");
+ png.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ png_actionPerformed(e);
+ }
+ });
+ outputValues.setText("Output Values...");
+ outputValues.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ outputValues_actionPerformed(e);
+ }
+ });
+ outputPoints.setText("Output points...");
+ outputPoints.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ outputPoints_actionPerformed(e);
+ }
+ });
+ outputProjPoints.setText("Output transformed points...");
+ outputProjPoints.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ outputProjPoints_actionPerformed(e);
+ }
+ });
+ print.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ print_actionPerformed(e);
+ }
+ });
+ viewMenu.setText("View");
+ viewMenu.addMenuListener(new MenuListener()
+ {
+ public void menuSelected(MenuEvent e)
+ {
+ viewMenu_menuSelected();
+ }
+
+ public void menuDeselected(MenuEvent e)
+ {
+ }
+
+ public void menuCanceled(MenuEvent e)
+ {
+ }
+ });
+ showLabels.setText("Show Labels");
+ showLabels.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ showLabels_actionPerformed(e);
+ }
+ });
+ print.setText("Print");
+ bgcolour.setText("Background Colour...");
+ bgcolour.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ bgcolour_actionPerformed(e);
+ }
+ });
+ originalSeqData.setText("Input Data...");
+ originalSeqData.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ originalSeqData_actionPerformed(e);
+ }
+ });
+ associateViewsMenu.setText("Associate Nodes With");
+ calcSettings.setText("Change Parameters");
+ nuclSetting.setText("Nucleotide matrix");
+ protSetting.setText("Protein matrix");
+ nuclSetting.addActionListener(new ActionListener()
+ {
+
+ @Override
+ public void actionPerformed(ActionEvent arg0)
+ {
+ nuclSetting_actionPerfomed(arg0);
+ }
+ });
+ protSetting.addActionListener(new ActionListener()
+ {
+
+ @Override
+ public void actionPerformed(ActionEvent arg0)
+ {
+ protSetting_actionPerfomed(arg0);
+ }
+ });
+ jvVersionSetting.setText("Jalview PCA Calculation");
+ jvVersionSetting.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent arg0)
+ {
+ jvVersionSetting_actionPerfomed(arg0);
+ }
+ });
+ calcSettings.add(jvVersionSetting);
+ calcSettings.add(nuclSetting);
+ calcSettings.add(protSetting);
+ statusPanel.setLayout(statusPanelLayout);
+ statusBar.setFont(new java.awt.Font("Verdana", 0, 12));
+ // statusPanel.setBackground(Color.lightGray);
+ // statusBar.setBackground(Color.lightGray);
+ // statusPanel.add(statusBar, null);
+ JPanel panelBar = new JPanel(new BorderLayout());
+ panelBar.add(jPanel2, BorderLayout.NORTH);
+ panelBar.add(statusPanel, BorderLayout.SOUTH);
+ this.getContentPane().add(panelBar, BorderLayout.SOUTH);