-\r
-public class GTreePanel extends JInternalFrame {\r
- BorderLayout borderLayout1 = new BorderLayout();\r
- public JScrollPane scrollPane = new JScrollPane();\r
- JMenuBar jMenuBar1 = new JMenuBar();\r
- JMenu jMenu1 = new JMenu();\r
- JMenuItem saveAsNewick = new JMenuItem();\r
- JMenuItem printMenu = new JMenuItem();\r
- JMenu jMenu2 = new JMenu();\r
- public JMenuItem fontSize = new JMenuItem();\r
- public JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();\r
- public JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();\r
- public JCheckBoxMenuItem fitToWindow = new JCheckBoxMenuItem();\r
- public JCheckBoxMenuItem placeholdersMenu = new JCheckBoxMenuItem();\r
- JMenuItem pngTree = new JMenuItem();\r
- JMenuItem epsTree = new JMenuItem();\r
- JMenu saveAsMenu = new JMenu();\r
- JMenuItem textbox = new JMenuItem();\r
-\r
- public GTreePanel() {\r
- try {\r
- jbInit();\r
- this.setJMenuBar(jMenuBar1);\r
- } catch (Exception e) {\r
- e.printStackTrace();\r
- }\r
- }\r
-\r
- private void jbInit() throws Exception {\r
- this.getContentPane().setLayout(borderLayout1);\r
- this.setBackground(Color.white);\r
- this.setFont(new java.awt.Font("Verdana", 0, 12));\r
- scrollPane.setOpaque(false);\r
- jMenu1.setText("File");\r
- saveAsNewick.setText("Newick Format");\r
- saveAsNewick.addActionListener(new ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- saveAsNewick_actionPerformed(e);\r
- }\r
- });\r
- printMenu.setText("Print");\r
- printMenu.addActionListener(new java.awt.event.ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- printMenu_actionPerformed(e);\r
- }\r
- });\r
- jMenu2.setText("View");\r
- fontSize.setText("Font Size - 12");\r
- fontSize.addActionListener(new java.awt.event.ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- fontSize_actionPerformed(e);\r
- }\r
- });\r
- bootstrapMenu.setText("Show Bootstrap Values");\r
- bootstrapMenu.addActionListener(new java.awt.event.ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- bootstrapMenu_actionPerformed(e);\r
- }\r
- });\r
- distanceMenu.setText("Show Distances");\r
- distanceMenu.addActionListener(new java.awt.event.ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- distanceMenu_actionPerformed(e);\r
- }\r
- });\r
- fitToWindow.setSelected(true);\r
- fitToWindow.setText("Fit To Window");\r
- fitToWindow.addActionListener(new java.awt.event.ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- fitToWindow_actionPerformed(e);\r
- }\r
- });\r
- epsTree.setText("EPS");\r
- epsTree.addActionListener(new java.awt.event.ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- epsTree_actionPerformed(e);\r
- }\r
- });\r
- pngTree.setText("PNG");\r
- pngTree.addActionListener(new java.awt.event.ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- pngTree_actionPerformed(e);\r
- }\r
- });\r
- saveAsMenu.setText("Save as");\r
- placeholdersMenu.setToolTipText(\r
- "Marks leaves of tree not associated with a sequence");\r
- placeholdersMenu.setText("Mark Unlinked Leaves");\r
- placeholdersMenu.addActionListener(new ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- placeholdersMenu_actionPerformed(e);\r
- }\r
- });\r
- textbox.setText("Output to Textbox...");\r
- textbox.addActionListener(new ActionListener() {\r
- public void actionPerformed(ActionEvent e) {\r
- textbox_actionPerformed(e);\r
- }\r
- });\r
- this.getContentPane().add(scrollPane, BorderLayout.CENTER);\r
- jMenuBar1.add(jMenu1);\r
- jMenuBar1.add(jMenu2);\r
- jMenu1.add(saveAsMenu);\r
- jMenu1.add(textbox);\r
- jMenu1.add(printMenu);\r
- jMenu2.add(fitToWindow);\r
- jMenu2.add(fontSize);\r
- jMenu2.add(distanceMenu);\r
- jMenu2.add(bootstrapMenu);\r
- jMenu2.add(placeholdersMenu);\r
- saveAsMenu.add(saveAsNewick);\r
- saveAsMenu.add(epsTree);\r
- saveAsMenu.add(pngTree);\r
- }\r
-\r
- public void printMenu_actionPerformed(ActionEvent e) {\r
- }\r
-\r
- public void fontSize_actionPerformed(ActionEvent e) {\r
- }\r
-\r
- public void distanceMenu_actionPerformed(ActionEvent e) {\r
- }\r
-\r
- public void bootstrapMenu_actionPerformed(ActionEvent e) {\r
+public class GTreePanel\r
+ extends JInternalFrame\r
+{\r
+ BorderLayout borderLayout1 = new BorderLayout();\r
+ public JScrollPane scrollPane = new JScrollPane();\r
+ JMenuBar jMenuBar1 = new JMenuBar();\r
+ JMenu jMenu1 = new JMenu();\r
+ JMenuItem saveAsNewick = new JMenuItem();\r
+ JMenuItem printMenu = new JMenuItem();\r
+ JMenu jMenu2 = new JMenu();\r
+ public JMenuItem font = new JMenuItem();\r
+ public JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();\r
+ public JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();\r
+ public JCheckBoxMenuItem fitToWindow = new JCheckBoxMenuItem();\r
+ public JCheckBoxMenuItem placeholdersMenu = new JCheckBoxMenuItem();\r
+ JMenuItem pngTree = new JMenuItem();\r
+ JMenuItem epsTree = new JMenuItem();\r
+ JMenu saveAsMenu = new JMenu();\r
+ JMenuItem textbox = new JMenuItem();\r
+ public JMenuItem originalSeqData = new JMenuItem();\r
+ public GTreePanel()\r
+ {\r
+ try\r
+ {\r
+ jbInit();\r
+ this.setJMenuBar(jMenuBar1);\r