- this._has_threshold= false;\r
- } //-- void deleteThreshold() \r
-\r
- /**\r
- * Returns the value of field 'aboveThreshold'.\r
- * \r
- * @return int\r
- * @return the value of field 'aboveThreshold'.\r
- */\r
- public int getAboveThreshold()\r
- {\r
- return this._aboveThreshold;\r
- } //-- int getAboveThreshold() \r
-\r
- /**\r
- * Returns the value of field 'annotation'.\r
- * \r
- * @return String\r
- * @return the value of field 'annotation'.\r
- */\r
- public java.lang.String getAnnotation()\r
- {\r
- return this._annotation;\r
- } //-- java.lang.String getAnnotation() \r
-\r
- /**\r
- * Returns the value of field 'colourScheme'.\r
- * \r
- * @return String\r
- * @return the value of field 'colourScheme'.\r
- */\r
- public java.lang.String getColourScheme()\r
- {\r
- return this._colourScheme;\r
- } //-- java.lang.String getColourScheme() \r
-\r
- /**\r
- * Returns the value of field 'maxColour'.\r
- * \r
- * @return int\r
- * @return the value of field 'maxColour'.\r
- */\r
- public int getMaxColour()\r
- {\r
- return this._maxColour;\r
- } //-- int getMaxColour() \r
-\r
- /**\r
- * Returns the value of field 'minColour'.\r
- * \r
- * @return int\r
- * @return the value of field 'minColour'.\r
- */\r
- public int getMinColour()\r
- {\r
- return this._minColour;\r
- } //-- int getMinColour() \r
-\r
- /**\r
- * Returns the value of field 'threshold'.\r
- * \r
- * @return float\r
- * @return the value of field 'threshold'.\r
- */\r
- public float getThreshold()\r
- {\r
- return this._threshold;\r
- } //-- float getThreshold() \r
-\r
- /**\r
- * Method hasAboveThreshold\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasAboveThreshold()\r
- {\r
- return this._has_aboveThreshold;\r
- } //-- boolean hasAboveThreshold() \r
-\r
- /**\r
- * Method hasMaxColour\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasMaxColour()\r
- {\r
- return this._has_maxColour;\r
- } //-- boolean hasMaxColour() \r
-\r
- /**\r
- * Method hasMinColour\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasMinColour()\r
- {\r
- return this._has_minColour;\r
- } //-- boolean hasMinColour() \r
-\r
- /**\r
- * Method hasThreshold\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasThreshold()\r
- {\r
- return this._has_threshold;\r
- } //-- boolean hasThreshold() \r
-\r
- /**\r
- * Method isValid\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean isValid()\r
- {\r
- try {\r
- validate();\r
- }\r
- catch (org.exolab.castor.xml.ValidationException vex) {\r
- return false;\r
- }\r
- return true;\r
- } //-- boolean isValid() \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param out\r
- */\r
- public void marshal(java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, out);\r
- } //-- void marshal(java.io.Writer) \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param handler\r
- */\r
- public void marshal(org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, handler);\r
- } //-- void marshal(org.xml.sax.ContentHandler) \r
-\r
- /**\r
- * Sets the value of field 'aboveThreshold'.\r
- * \r
- * @param aboveThreshold the value of field 'aboveThreshold'.\r
- */\r
- public void setAboveThreshold(int aboveThreshold)\r
- {\r
- this._aboveThreshold = aboveThreshold;\r
- this._has_aboveThreshold = true;\r
- } //-- void setAboveThreshold(int) \r
-\r
- /**\r
- * Sets the value of field 'annotation'.\r
- * \r
- * @param annotation the value of field 'annotation'.\r
- */\r
- public void setAnnotation(java.lang.String annotation)\r
- {\r
- this._annotation = annotation;\r
- } //-- void setAnnotation(java.lang.String) \r
-\r
- /**\r
- * Sets the value of field 'colourScheme'.\r
- * \r
- * @param colourScheme the value of field 'colourScheme'.\r
- */\r
- public void setColourScheme(java.lang.String colourScheme)\r
- {\r
- this._colourScheme = colourScheme;\r
- } //-- void setColourScheme(java.lang.String) \r
-\r
- /**\r
- * Sets the value of field 'maxColour'.\r
- * \r
- * @param maxColour the value of field 'maxColour'.\r
- */\r
- public void setMaxColour(int maxColour)\r
- {\r
- this._maxColour = maxColour;\r
- this._has_maxColour = true;\r
- } //-- void setMaxColour(int) \r
-\r
- /**\r
- * Sets the value of field 'minColour'.\r
- * \r
- * @param minColour the value of field 'minColour'.\r
- */\r
- public void setMinColour(int minColour)\r
- {\r
- this._minColour = minColour;\r
- this._has_minColour = true;\r
- } //-- void setMinColour(int) \r
-\r
- /**\r
- * Sets the value of field 'threshold'.\r
- * \r
- * @param threshold the value of field 'threshold'.\r
- */\r
- public void setThreshold(float threshold)\r
- {\r
- this._threshold = threshold;\r
- this._has_threshold = true;\r
- } //-- void setThreshold(float) \r
-\r
- /**\r
- * Method unmarshal\r
- * \r
- * \r
- * \r
- * @param reader\r
- * @return Object\r
- */\r
- public static java.lang.Object unmarshal(java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- return (jalview.schemabinding.version2.AnnotationColours) Unmarshaller.unmarshal(jalview.schemabinding.version2.AnnotationColours.class, reader);\r
- } //-- java.lang.Object unmarshal(java.io.Reader) \r
-\r
- /**\r
- * Method validate\r
- * \r
- */\r
- public void validate()\r
- throws org.exolab.castor.xml.ValidationException\r