- /**\r
- * Method getSetting.\r
- * \r
- * @param index\r
- * @throws java.lang.IndexOutOfBoundsException if the index\r
- * given is outside the bounds of the collection\r
- * @return the value of the\r
- * jalview.schemabinding.version2.Setting at the given index\r
- */\r
- public jalview.schemabinding.version2.Setting getSetting(\r
- final int index)\r
- throws java.lang.IndexOutOfBoundsException {\r
- // check bounds for index\r
- if (index < 0 || index >= this._settingList.size()) {\r
- throw new IndexOutOfBoundsException("getSetting: Index value '" + index + "' not in range [0.." + (this._settingList.size() - 1) + "]");\r
- }\r
- \r
- return (jalview.schemabinding.version2.Setting) _settingList.get(index);\r
- }\r
-\r
- /**\r
- * Method getSetting.Returns the contents of the collection in\r
- * an Array. <p>Note: Just in case the collection contents\r
- * are changing in another thread, we pass a 0-length Array of\r
- * the correct type into the API call. This way we <i>know</i>\r
- * that the Array returned is of exactly the correct length.\r
- * \r
- * @return this collection as an Array\r
- */\r
- public jalview.schemabinding.version2.Setting[] getSetting(\r
- ) {\r
- jalview.schemabinding.version2.Setting[] array = new jalview.schemabinding.version2.Setting[0];\r
- return (jalview.schemabinding.version2.Setting[]) this._settingList.toArray(array);\r
- }\r
-\r
- /**\r
- * Method getSettingCount.\r
- * \r
- * @return the size of this collection\r
- */\r
- public int getSettingCount(\r
- ) {\r
- return this._settingList.size();\r
- }\r
-\r
- /**\r
- * Method isValid.\r
- * \r
- * @return true if this object is valid according to the schema\r
- */\r
- public boolean isValid(\r
- ) {\r
- try {\r
- validate();\r
- } catch (org.exolab.castor.xml.ValidationException vex) {\r
- return false;\r
- }\r
- return true;\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param out\r
- * @throws org.exolab.castor.xml.MarshalException if object is\r
- * null or if any SAXException is thrown during marshaling\r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- */\r
- public void marshal(\r
- final java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
- Marshaller.marshal(this, out);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param handler\r
- * @throws java.io.IOException if an IOException occurs during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- * @throws org.exolab.castor.xml.MarshalException if object is\r
- * null or if any SAXException is thrown during marshaling\r
- */\r
- public void marshal(\r
- final org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
- Marshaller.marshal(this, handler);\r
- }\r
-\r
- /**\r
- */\r
- public void removeAllGroup(\r
- ) {\r
- this._groupList.clear();\r
- }\r
-\r
- /**\r
- */\r
- public void removeAllSetting(\r
- ) {\r
- this._settingList.clear();\r
- }\r
-\r
- /**\r
- * Method removeGroup.\r
- * \r
- * @param vGroup\r
- * @return true if the object was removed from the collection.\r
- */\r
- public boolean removeGroup(\r
- final jalview.schemabinding.version2.Group vGroup) {\r
- boolean removed = _groupList.remove(vGroup);\r
- return removed;\r
- }\r
-\r
- /**\r
- * Method removeGroupAt.\r
- * \r
- * @param index\r
- * @return the element removed from the collection\r
- */\r
- public jalview.schemabinding.version2.Group removeGroupAt(\r
- final int index) {\r
- java.lang.Object obj = this._groupList.remove(index);\r
- return (jalview.schemabinding.version2.Group) obj;\r
- }\r
-\r
- /**\r
- * Method removeSetting.\r
- * \r
- * @param vSetting\r
- * @return true if the object was removed from the collection.\r
- */\r
- public boolean removeSetting(\r
- final jalview.schemabinding.version2.Setting vSetting) {\r
- boolean removed = _settingList.remove(vSetting);\r
- return removed;\r
- }\r
-\r
- /**\r
- * Method removeSettingAt.\r
- * \r
- * @param index\r
- * @return the element removed from the collection\r
- */\r
- public jalview.schemabinding.version2.Setting removeSettingAt(\r
- final int index) {\r
- java.lang.Object obj = this._settingList.remove(index);\r
- return (jalview.schemabinding.version2.Setting) obj;\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param index\r
- * @param vGroup\r
- * @throws java.lang.IndexOutOfBoundsException if the index\r
- * given is outside the bounds of the collection\r
- */\r
- public void setGroup(\r
- final int index,\r
- final jalview.schemabinding.version2.Group vGroup)\r
- throws java.lang.IndexOutOfBoundsException {\r
- // check bounds for index\r
- if (index < 0 || index >= this._groupList.size()) {\r
- throw new IndexOutOfBoundsException("setGroup: Index value '" + index + "' not in range [0.." + (this._groupList.size() - 1) + "]");\r
- }\r
- \r
- this._groupList.set(index, vGroup);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param vGroupArray\r
- */\r
- public void setGroup(\r
- final jalview.schemabinding.version2.Group[] vGroupArray) {\r
- //-- copy array\r
- _groupList.clear();\r
- \r
- for (int i = 0; i < vGroupArray.length; i++) {\r
- this._groupList.add(vGroupArray[i]);\r
- }\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param index\r
- * @param vSetting\r
- * @throws java.lang.IndexOutOfBoundsException if the index\r
- * given is outside the bounds of the collection\r
- */\r
- public void setSetting(\r
- final int index,\r
- final jalview.schemabinding.version2.Setting vSetting)\r
- throws java.lang.IndexOutOfBoundsException {\r
- // check bounds for index\r
- if (index < 0 || index >= this._settingList.size()) {\r
- throw new IndexOutOfBoundsException("setSetting: Index value '" + index + "' not in range [0.." + (this._settingList.size() - 1) + "]");\r
- }\r
- \r
- this._settingList.set(index, vSetting);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param vSettingArray\r
- */\r
- public void setSetting(\r
- final jalview.schemabinding.version2.Setting[] vSettingArray) {\r
- //-- copy array\r
- _settingList.clear();\r
- \r
- for (int i = 0; i < vSettingArray.length; i++) {\r
- this._settingList.add(vSettingArray[i]);\r
- }\r
- }\r
-\r
- /**\r
- * Method unmarshal.\r
- * \r
- * @param reader\r
- * @throws org.exolab.castor.xml.MarshalException if object is\r
- * null or if any SAXException is thrown during marshaling\r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- * @return the unmarshaled\r
- * jalview.schemabinding.version2.FeatureSettings\r
- */\r
- public static jalview.schemabinding.version2.FeatureSettings unmarshal(\r
- final java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
- return (jalview.schemabinding.version2.FeatureSettings) Unmarshaller.unmarshal(jalview.schemabinding.version2.FeatureSettings.class, reader);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- */\r
- public void validate(\r
- )\r
- throws org.exolab.castor.xml.ValidationException {\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r